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Submissions from 2011

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Loose Ligands and Available Iron in the Ocean, Ronald Benner

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The Relationship between Population Structure and Aluminum Tolerance in Cultivated Sorghum, Fernanda F. Caniato, Claudia T. Guimarães, Martha Hamblin, Claire Billot, Jean-François Rami, Barbara Hufnagel, Leon V. Kochian, Jiping Liu, Antonion Augusto F. Garcia, C. Tom Hash, Punna Ramu, Sharon Mitchell, Stephen Kresovich, Antônio Carlos Oliveira, Gisela de Avellar, Aluízio Borém, Jean-Christophe Glaszmann, Robert E. Schaffert, and Jurandir V. Magalhaes

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A Novel Method to Estimate DOC from CDOM Absorption Coefficients in Coastal Waters, Cédric G. Fichot and Ronald Benner

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Alternative Mechanism for Bacteriophage Adsorption to the Motile Bacterium Caulobacter Crescentus, Ricardo C. Guerrero-Ferreira, Patrick H. Viollier, Bert Ely, Jeanne S. Poindexter, Maria Georgieva, Grant J. Jensen, and Elizabeth R. Wright

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Alternative Mechanism for Bacteriophage Adsorption to the Motile Bacterium Caulobacter Crescentus, Ricardo C. Guerrero-Ferreira, Patrick H. Viollier, Bert Ely, Jeanne S. Poindexter, Maria Georgieva, Grant J. Jensen, and Elizabeth R. Wright

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The Effect of B27 Supplement on Promoting In Vitro Propagation of Her2/neu-Transformed Mammary Tumorspheres, Yiben Gu, Jie Fu, Pang-Kuo Lo, Shunqi Wang, Qian Wang, and Hexin Chen

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Bacterial Carbon Content and the Living and Detrital Bacterial Contributions to Suspended Particulate Organic Carbon in the North Pacific Ocean, Nobuyuki Kawasaki, Rumi Sohrin, Hiroshi Ogawa, Toshi Nagata, and Ronald Benner

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Auxin Regulation of Arabidopsis Flower Development Involves Members of the AINTEGUMENTA-LIKE/PLETHORA (AIL/PLT) Family, Beth A. Krizek

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Aintegumenta and Aintegumenta-Like6 Regulate Auxin-Mediated Flower Development in Arabidopsis, Beth A. Krizek

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AINTEGUMENTA-LIKE6 Regulates Cellular Differentiation in Flowers, Beth A. Krizek and Marcie Eaddy

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Across Bacterial Phyla, Distantly-Related Genomes with Similar Genomic GC Content Have Similar Patterns of Amino Acid Usage, John Lightfield, Noah R. Fram, and Bert Ely

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Depth Distribution of Alkaline Phosphatases and Phosphonate Utilization Genes in the North Pacific Subtropical Gyre, Haiwei Luo, Hongmei Zhang, Richard A. Long, and Ronald Benner

Submissions from 2010

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Biological and Photochemical Transformations of Lignin Phenols and Amino Acids in Riverine Dissolved Organic Matter, Ronald Benner and Karl Kaiser

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Performance-Based Data in the Study of STEM PhD Education, David Feldon, Michelle Maher, and Briana Eileen Timmerman

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Response to Best Test of Ph.D. Student Success, by Gunnar Newquist, David Feldon, Briana Eileen Timmerman, and Michelle Maher

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Translating Expertise Into Effective Instruction: The Impacts of Cognitive Task Analysis (CTA) on Laboratory Report Quality and Student Retention in the Biological Sciences, David Feldon, Briana Eileen Timmerman, Kirk A. Stowe, and Richard Showman

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Weeds in the Flower Garden: An Exploration of Plagiarism in Graduate Students’ Research Proposals and its Connection to Enculturation, ESL, and Contextual Factors, Joanna Gilmore, Denise Strickland, Briana Eileen Timmerman, Michelle Maher, and David Feldon

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Genomic Organization and Molecular Phylogenies of the Beta (β) Keratin Multigene Family in the Chicken (Gallus gallus) and Zebra Finch (Taeniopygia guttata): Implications for Feather Evolution, Matthew J. Greenwold and Roger H. Sawyer

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Organismal Climatology: Analyzing Environmental Variability at Scales Relevant to Physiological Stress, Brian Helmuth, Bernardo R. Broitman, Lauren Yamane, Sarah E. Gilman, Katharine Mach, K. A.S. Mislan, and Mark W. Denny

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Evolution of an MHC Class La Gene Fragment in Four North American Morone Species, J. X. Liu and Bert Ely

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Development of a ‘Universal’ Rubric for Assessing Undergraduates’ Scientific Reasoning Skills Using Scientific Writing, Briana Eileen Timmerman, Denise Strickland, Robert L. Johnson, and John R. Payne

Submissions from 2009

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Biochemical Indicators for the Bioavailability of Organic Carbon in Ground Water, Francis H. Chapelle, Paul M. Bradley, Dan J. Goode, Claire Tiedeman, Pierre J. Lacombe, Karl Kaiser, and Ronald Benner

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From Cells to Coastlines: How Can We Use Physiology to Forecast the Impacts of Climate Change?, Brian Helmuth

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Associated Analysis of Single Nucleotide Polymorphisms of IGF2 Gene’s Exon 8 with Growth Traits in Wuzhishan Pig, Guanyu Hou, Dongjin Wang, Song Guan, Hongpu Zeng, Xianzhou Huang, and Yuehui Ma

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Aintegumenta and Aintegumenta-Like6 Act Redundantly to Regulate Arabidopsis Floral Growth and Patterning, Beth A. Krizek

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Sibship Reconstruction Demonstrates the Extremely Low Effective Population Size of Striped Bass Morone Saxatilis in the Santee-Cooper System, South Carolina, USA, Jin-Xian Liu and Bert Ely

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Complex Evolution of a Highly-conserved Microsatellite Locus in Several Fish Species, J.-X. Liu and Bert Ely

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Subcellular Localization of Marine Bacterial Alkaline Phosphatases, Haiwei Luo, Ronald Benner, Richard A. Long, and Jianjun Hu

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An Intertidal Sea Star Adjusts Thermal Inertia to Avoid Extreme Body Temperatures, Sylvain Pincebourde, Eric Sanford, and Brian Helmuth

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Faculty Should Consider Peer Review as a Means of Improving Students' Scientific Reasoning Skill, Briana Eileen Timmerman and Denise Strickland

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Organic Matter Diagenesis and Bacterial Contributions to Detrital Carbon and Nitrogen in the Amazon River System, Luc Tremblay and Ronald Benner

Submissions from 2008

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Diversity Analysis of Elite Maize Inbred Lines Adapted to West and Central Africa Using SSR Markers, V. O. Adetimirin, I. Vroh-Bi, C. The, A. Menkir, S. E. Mitchell, and Stephen Kresovich

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Dispersion and Cycling of Organic Matter from Sepik River Outflow to the Papua New Guinea Coast as Determined from Biomarkers, Kathryn A. Burns, Peter J. Hernes, Diane Brinkman, Anita Poulsen, and Ronald Benner

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Amino Acid and Amino Sugar Yields and Compositions as Indicators of Dissolved Organic Matter Diagenesis, Jenny Davis, Karl Kaiser, and Ronald Benner

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Lis1 and Ndel1 Influence the Timing of Nuclear Envelope Breakdown in Neural Stem Cells, Sachin Hebbar, Mariano T. Mesngon, Aimee M. Guillotte, Bhavim Desai, Ramses Ayala, and Deanna S. Smith

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Biochemical Composition and Size Distribution of Organic Matter at the Pacific and Atlantic Time-Series Stations, Karl Kaiser and Ronald Benner

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Major Bacterial Contribution to the Ocean Reservoir of Detrital Organic Carbon and Nitrogen, Karl Kaiser and Ronald Benner

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Making Bigger Plants: Key Regulators of Final Organ Size, Beth A. Krizek

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Peer Review In An Undergraduate Biology Curriculum: Effects On Students’ Scientific Reasoning, Writing and Attitudes, Briana Eileen Timmerman

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Curricular Reform and Inquiry Teaching in Biology: Where Are Our Efforts Most Fruitfully Invested?, Briana Eileen Timmerman, Denise C. Strickland, and Susan M. Carstensen

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Marine Bioplolymer Self-Assembly: Implications for Carbon Cycling in the Ocean, Pedro Verdugo, Monica V. Orellana, Wei-Chun Chin, Timothy W. Petersen, Ger van den Eng, Ronald Benner, and John I. Hedges

Submissions from 2007

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The EAR-motif of the Cys2/His2-Type Zinc Finger Protein Zat7 Plays a Key Role in the Defense Response of Arabidopsis to Salinity Stress, Sultan Ciftci-Yilmaz, Mustafa R. Morsy, Luhua Song, Alicia Coutu, Beth A. Krizek, Michael W. Lewis, Daniel Warren, John Cushman, Erin L. Connolly, and Ron Mittler

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Quantitative Estimates of Labile and Semi-Labile Dissolved Organic Carbon in the Western Arctic Ocean: A Molecular Approach, Jenny Davis and Ronald Benner

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Species Invasion Shifts the Importance of Predator Dependence, Blaine D. Griffen and David G. Delaney

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Amino Acid Nitrogen Isotopic Fractionation Patterns as Indicators of Heterotrophy in Plankton, Particulate, and Dissolved Organic Matter, Matthew D. McCarthy, Ronald Benner, Cindy Lee, and Marilyn L. Fogel

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Extracellular Stimuli Specifically Regulate Localized Levels of Individual Neuronal mRNAs, Dianna E. Willis, Erna A. van Niekerk, Yukio Sasaki, Mariano Mesngon, Tanuja T. Merianda, Gervan G. Williams, Marvin Kendall, Deanna S. Smith, Gary J. Bassell, and Jeffery L. Twiss

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Development of New Simple Sequence Repeat Markers for Pearl Millet, O. P. Yadav, S. E. Mitchell, A. Zamora, Theresa M. Fulton, and Stephen Kresovich

Submissions from 2006

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African-American Mitochondrial Dnas Often Match Mtdnas Found in Multiple African Ethnic Groups, Bert Ely, Jamie Lee Wilson, Fatimah Jackson, and Bruce A. Jackson

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Terrigenous Organic Matter Sources and Reactivity in the North Atlantic Ocean and a Comparison to the Arctic and Pacific Oceans, Peter J. Hernes and Ronald Benner

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Characterization of a Major Refractory Component of Marine Dissolved Organic Matter, Norbert Hertkorn, Ronald Benner, Moritz Frommberger, Philippe Schmitt-Kopplin, Matthias Witt, Karl Kaiser, Antonius Kettrup, and John I. Hedges

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Linking Bacterioplankton Community Structures to Environmental State Variables and Phytoplankton Assemblages in Two South Carolina Salt Marsh Estuaries, Wes Johnson, Alan J. Lewitus, and Madilyn Fletcher

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Bacterial Release of Dissolved Organic Matter During Cell Growth and Decline: Molecular Origin and Composition, Nobu Kawasaki and Ronald Benner

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RABBIT EARS is a Second-Whorl Repressor of AGAMOUS That Maintains Spatial Boundaries in Arabidopsis Flowers, Beth A. Krizek, Michael W. Lewis, and Jennifer C. Fletcher

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Mapping Sequences Required for Nuclear Localization and the Transcriptional Activation Function of the Arabidopsis Protein AINTEGUMENTA, Beth A. Krizek and Chidananda Sulli

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Chemical Characteristics of Dissolved Organic Nitrogen in an Oligotrophic Subtropical Coastal Ecosystem, Nagamitsu Maie, Kathleen J. Parish, Akira Watanabe, Heike Knicker, Ronald Benner, Tomonori Abe, Karl Kaiser, and Rudolf Jaffe

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Regulation of Cytoplasmic Dynein ATPase by Lis1, Mariano T. Mesngon, Cataldo Tarricone, Sachin Hebbar, Aimee Guillotte, E. William Schmitt, Lorene Lanier, Andrea Musacchio, Stephen J. King, and Deanna S. Smith

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AINTEGUMENTA Contributes to Organ Polarity and Regulates Growth of Lateral Organs in Combination with YABBY Genes, Staci Nole-Wilson and Beth A. Krizek

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Nature and Dynamics of Phosphorus-Containing Components of Marine Dissolved and Particulate Organic Matter, Poulomi Sannigrahi, Ellery D. Ingall, and Ronald Benner

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Panzea: A Database and Resource for Molecular and Functional Diversity in the Maize Genome, Wei Zhao, Payan Canaran, Rebecca Jurkuta, Theresa Fulton, Jeffrey Glaubitz, Edward Buckler, John Doebley, Brandon Gaut, Major Goodman, Jim Holland, Stephen Kresovich, Michael McMullen, Lincoln Stein, and Doreen Ware

Submissions from 2005

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Terrigenous Dissolved Organic Matter in the Arctic Ocean and Its Transport to Surface and Deep Waters of the North Atlantic, Ronald Benner, Patrick Louchouarn, and Rainer M. W. Amon

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Linkages Among Runoff, Dissolved Organic Carbon, and the Stable Oxygen Isotope Composition of Seawater and Other Water Mass Indicators in the Arctic Ocean, Lee W. Cooper, Ronald Benner, James W. McClelland, Bruce J. Peterson, Robert M. Holmes, Peter A. Raymond, Dennis A. Hansell, Jacqueline M. Grebmeier, and Louis A. Codispoti

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Seasonal Trends in the Abundance, Composition and Bioavailability of Particulate and Dissolved Organic Matter in the Chukchi/Beaufort Seas and Western Canada Basin, Jenny Davis and Ronald Benner

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Consequences of the Historical Demography on the Global Population Structure of Two Highly Migratory Cosmopolitan Marine Fishes: The Yellowfin Tuna (Thunnus Albacares) and the Skipjack Tuna (Katsuwonus Pelamis), Bert Ely, Jordi Viñas, Jaime R. Alvarado Bremer, Donna Black, Luciano Lucas, Kelly Covello, Alexis V. Labrie, and Eric Thelen

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Hydrolysis-Induced Racemization of Amino Acids, Karl Kaiser and Ronald Benner

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Toward Sequencing the Sorghum Genome: A U.S. National Science Foundation-Sponsored Workshop Report, Stephen Kresovich, Brad Barbazuk, Joseph A. Bedell, Andrew Borrell, C. Robin Buell, John Burke, Sandra Clifton, Marie-Michéle Cordonnier-Ptratt, Stan Cox, Jeff Dahlberg, John Erpelding, Theresa M. Fulton, Bob Fulton, Lucinda Fulton, Alan R. Gingle, C. Tom Hash, Yinghua Huang, David Jordan, Patricia E. Klein, Robert R. Klein, Jurandir Magalhaes, Richard McCombie, Paul Moore, John E. Mullet, Peggy Ozias-Akins, Andrew H. Paterson, Kay Porter, Lee Pratt, Bruce Roe, William Rooney, Patrick S. Schnable, David M. Stelly, Mitchell Tuinstra, Doreen Ware, and Ujwala Warek

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Molecular Mechanisms of Flower Development: An Armchair Guide, Beth A. Krizek and Jennifer C. Fletcher

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Arabidopsis H+-PPase AVP1 Regulates Auxin-Mediated Organ Development, Jisheng Li, Haibing Yang, Wendy Ann Peer, Gregory Richter, Joshua Blakeslee, Anindita Bandyopadhyay, Boosaree Titapiwantakun, Soledad Undurraga, Mariya Khodakovskaya, Elizabeth L. Richards, Beth A. Krizek, Angus S. Murphy, Simon Gilroy, and Roberto Gaxiola

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AINTEGUMENTA-like (AIL) Genes Are Expressed in Young Tissues and May Specify Meristematic or Division-Competent States, Staci Nole-Wilson, Traci L. Tranby, and Beth A. Krizek

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Arctic System on Trajectory to New, Seasonally Ice-free State, Jonathan T. Overpeck, Matthew Sturm, Jennifer A. Francis, Donald K. Perovich, Mark C. Serreze, Ronald Benner, Eddy C. Carmack, Stuart F. Chapin III, Craig S. Gerlach, Lawrence C. Hamilton, Larry D. Hinzman, Marika Holland, Henry P. Huntington, Jeffrey R. Key, Andrea H. Lloyd, Glen M. McDonald, Joe McFadden, David Noone, Terry D. Prowse, Peter Schlosser, and Charles Vörösmarty

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Cycling of Dissolved and Particulate Organic Matter at Station Aloha: Insights from 13C NMR Spectroscopy Coupled with Elemental, Isotopic and Molecular Analyses, Poulomi Sannigrahi, Ellery D. Ingall, and Ronald Benner

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Photochemical Transformations of Riverine Dissolved Organic Matter: Effects on Estuarine Bacterial Metabolism and Nutrient Demand, Erik M. Smith and Ronald Benner

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Microbial Contributions to N-Immobilization and Organic Matter Preservation in Decaying Plant Detritus, Luc Tremblay and Ronald Benner

Submissions from 2004

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What Happens to Terrestrial Organic Matter in the Ocean?, Ronald Benner

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Export of Young Terrigenous Dissolved Organic Carbon from Rivers to the Arctic Ocean, Ronald Benner, Bryan Benitez-Nelson, Karl Kaiser, and Rainer M. W. Amon

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Organic Biomarkers for Tracing Carbon Cycling in the Gulf of Papua (Papua New Guinea), Kathryn A. Burns, Paul Greenwood, Ronald Benner, Diane L. Brinkman, Greg Brunskill, Susan Codi, and Irena Zagorskis

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Transformation of Dissolved and Particulate Materials on Continental Shelves Influenced by Large Rivers: Plume Processes, Michael J. Dagg, Ronald Benner, Steven Lohrenz, and David Lawrence

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Genetic Diversity of Peanut (Arachis hypogaea L.) and its Wild Relatives Based on the Analysis of Hypervariable Regions of the Genome, Marcio de Carvalho Moretzsohn, Mark S. Hopkins, Sharon E. Mitchell, Stephen Kresovich, Jose Francisco Montenegro Valls, and Marcio Elias Ferreira

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Particle Removal Rates by the Mud Shrimp Upogebia pugettensis, its Burrow, and a Commensal Clam: Effects on Estuarine Phytoplankton Abundance, Blaine D. Griffen, Theodore H. DeWitt, and Chris Langdon

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Individual Cell Growth Rates of Marine Bacteria, Measured by Bromodeoxyuridine Incorporation, Koji Hamasaki, Richard A. Long, and Farooq Azam

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Cumulative Contents for 2004, Xinyu Huang

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Hydrogen Deficient Molecules in Natural Riverine Water Samples - Evidence for the Existence of Black Carbon in DOM, Sunghwan Kim, Louis A. Kaplan, Ronald Benner, and Patrick G. Hatcher

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Symposium on New Approaches in Marine Organic Biogeochemistry: A Tribute to the Life and Science of John I. Hedges, Cindy Lee, Stuart G. Wakeham, and Ronald Benner

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Amino Acid Carbon Isotopic Fractionation Patterns in Oceanic Dissolved Organic Matter: An Unaltered Photoautotrophic Source for Dissolved Organic Nitrogen in the Ocean?, Matthew D. McCarthy, Ronald Benner, Cindy Lee, John I. Hedges, and Marilyn L. Fogel

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Competition Between Biological and Photochemical Processes in the Mineralization of Dissolved Organic Carbon, Ingrid Obernosterer and Ronald Benner

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Dynamics of Dissolved Organic Carbon, Nitrogen and Phosphorus in a Seagrass Meadow of Laguna Madre, Texas, Susan Ziegler, Edith Kaiser, and Ronald Benner

Submissions from 2003

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Combined Neutral Sugars as Indicators of the Diagenetic State of Dissolved Organic Matter in the Arctic Ocean, Rainer M.W. Amon and Ronald Benner

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Abundance of Amino Sugars and Peptidoglycan in Marine Particulate and Dissolved Organic Matter, Ronald Benner and Karl Kaiser

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AINTEGUMENTA Utilizes a Mode of DNA Recognition Distinct From That Used by Proteins Containing a Single AP2 Domain, Beth A. Krizek

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Developing Transgenic Arabidopsis Plants to be Metal-Specific Bioindicators, Beth A. Krizek, Valerie Prost, Ratan M. Joshi, Terry Stoming, and Travis C. Glenn

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Acoustic Transmission in Normal Human Hips: Structural Testing of Joint Symmetry, Kevin S.C. Kwong, Xiaolin Huang, Jack Chun Yiu Cheng, and John H. Evans

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New Technique for Early Screening of Developmental Dysplasia of the Hip: Pilot Study, Kevin S. Kwong, Xiaolin Huang, Jack Chun Yiu Cheng, and John Evans

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P-Limitation of Respiration in the Sargasso Sea and Uncoupling of Bacteria from P-Regeneration in Size-Fractionation Experiments, Ingrid Obernosterer, Nobu Kawasaki, and Ronald Benner

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Microalgal-Meiofaunal Trophic Relationships in Muddy Intertidal Estuarine Sediments, James L. Pinckney, Kevin R. Carman, S. Elizabeth Lumsden, and Sabrina N. Hymel

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Hydroxy Fatty Acids in Marine Dissolved Organic Matter as Indicators of Bacterial Membrane Material, Stuart G. Wakeham, Tamara K. Pease, and Ronald Benner

Submissions from 2002

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Estimating the Spatial Extent of Bottom-Water Hypoxia and Habitat Degradation in a Shallow Estuary, Christopher P. Buzzelli, Richard A. Luettich Jr., Sean P. Powers, Charles H. Peterson, Jesse E. McNinch, James L. Pinckney, and Hans W. Paerl

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Thin Laser Light Sheet Microscope for Microbial Oceanography, Eran Fuchs, Jules S. Jaffe, Richard A. Long, and Farooq Azam

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Transport and Diagenesis of Dissolved and Particulate Terrigenous Organic Matter in the North Pacific Ocean, Peter J. Hernes and Ronald Benner

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Clinical Screening of Developmental Dysplasia of the Hip in Neonates by Acoustical Technique, Xiaolin Huang

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Seasonal Niche Strategy of the Bloom-Forming Dinoflagellate Heterocapsa triquetra, R. W. Litaker, P. A. Tester, C. S. Duke, B. E. Kenney, James L. Pinckney, and J. Ramus

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Simple, Compact Source for Low-Temperature Air Plasmas, D. P. Sheehan, J. Lawson, M. Sosa, and Richard A. Long