Part of the Engineering Commons

Works by Homayoun Valafar in Engineering

2023

Reducing Brain Kynurenic Acid Synthesis Precludes Kynurenine-Induced Sleep Disturbances, Katherine M. Rentschler, Snezana Milosavljevic, Annalisa M. Baratta, Courtney J. Wright, Maria V. Piroli, Zachary Tentor, Homayoun Valafar, Christian O'Reilly, Ana Pocivavsek
Publications

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2018

Mobile Decision Support Tool for Emergency Departments and Mass Casualty Incidents (EDIT): Initial Study, Nicholas Boltin, Diego Valdes, Joan M. Culley, Homayoun Valafar
Faculty Publications

2017

TALI: Local Alignment of Protein Structures Using Backbone Torsion Angles, Xijiang Miao, Peter J. Waddell, Homayoun Valafar
Faculty Publications

Choosing Between Responsive-Design Websites Versus Mobile Apps for Your Mobile Behavioral Intervention: Presenting Four Case Studies, Gabrielle Turner-McGrievy, Sarah B. Hales, Danielle E. Schoffman, Homayoun Valafar, Keith Brazendale, Robert Glenn Weaver, Michael W. Beets, Michael David Wirth, Nitin Shivappa, Trisha Mandes, James R. Hébert, Sara Wilcox, Andrew Hester, Matthew J. McGrievy
Faculty Publications

Trading Pounds for Points: Engagement and Weight Loss in a Mobile Health Intervention, Sarah Hales, Gabrielle M. Turner-McGrievy, Sarah Wilcox, Rachel E. Davis, Arjang Fahim, Michael Huhns, Homayoun Valafar
Faculty Publications

Identification of Novel Cancer Therapeutic Targets Using a Designed and Pooled shrna Library Screen, David Oliver, Hao Ji, Piaomu Liu, Alexander Gasparian, Ellen Gardiner, Samuel Lee, Adrian Zenteno, Lillian O. Perinskaya, Mengqian Chen, Phillip Buckhaults, Eugenia Broude, Michael D. Wyatt, Homayoun Valafar, Edsel A. Pena, Michael Shtutman
Faculty Publications

2016

A Mixed-Methods Approach to the Development, Refinement, and Pilot Testing of Social Networks for Improving Healthy Behaviors, Sarah Hales, Gabrielle Turner-McGrievy, Arjang Fahim, Andrew Freix, Sara Wilcox, Rachel E. Davis, Michael N. Huhns, Homayoun Valafar
Faculty Publications

Social Networks for Improving Healthy Weight Loss Behaviors for Overweight and Obese Adults: A Randomized Clinical Trial of the Social Pounds off Digitally (Social Pod) Mobile App, Sarah Hales, Gabrielle Turner-McGrievy, Sara Wilcox, Arjang Fahim, Rachel E. Davis, Micheal Huhns, Homayoun Valafar
Faculty Publications

Recognition of Smoking Gesture Using Smart Watch Technology, Casey A. Cole, Bethany Janos, Dien Anshari, James Thrasher, Scott Strayer, Homayoun Valafar
Faculty Publications

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Structure Calculation and Reconstruction of Discrete-State Dynamics from Residual Dipolar Couplings., Casey A. Cole, Rishi Mukhopadhyay, Hanin Omar, Mirko Hennig, Homayoun Valafar
Faculty Publications

2014

Improvements to Redcraft: A Software Tool for Simultaneous Characterization of Protein Backbone Structure and Dynamics from Residual Dipolar Couplings, Mikhail Simin, Stephanie Irausquin, Casey A. Cole, Homayoun Valafar
Faculty Publications

Dynafold: A Dynamic Programming Approach to Protein Backbone Structure Determination from Minimal Sets of Residual Dipolar Couplings, Rishi Mukhopadhyay, Stephanie Irausquin, Christopher Schmidt, Homayoun Valafar
Faculty Publications

2013

Detecting Smoking Events Using Accelerometer Data Collected via Smartwatch Technology: A Feasibility Study, Casey A Cole, Dien Anshari, Victoria Lambert, Jim Thrasher, Homayoun Valafar
Faculty Publications

Advances in the REDCAT Software Package, Christopher Schmidt, Stephanie J. Irausquin, Homayoun Valafar
Faculty Publications

Advances in the REDCAT Software Package, Chris Schmidt, Stephanie J. Irausquin, Homayoun Valafar
Faculty Publications

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Protein Structure Validation and Identification from Unassigned Residual Dipolar Coupling Data Using 2D-PDPA, Arjang Fahim, Rishi Mukhopadhyay, Ryan Yandle, James H. Prestegard, Homayoun Valafar
Faculty Publications

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Protein Structure Validation and Identification from Unassigned Residual Dipolar Coupling Data Using 2D-PDPA, Arjang Fahim, Rishi Mukhopadhyay, Ryan Yandle, James H. Prestegard, Homayoun Valafar
Faculty Publications

An Artificial Neural Network Approach to Improving the Correlation Between Protein Energetics and the Backbone Structure, Timothy M. Fawcett, Stephanie J. Irausquin, Mikhail Simin, Homayoun Valafar
Faculty Publications

2012

A Review of REDCRAFT: Simultaneous Investigation of Structure and Dynamics of Proteins from RDC Restraints, Homayoun Valafar, Mikhail Simin, Stephanie Irausquin
Faculty Publications

Multiple Structure Alignment with msTALI, Paul Shealy, Homayoun Valafar
Faculty Publications

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Multiple Structure Alignment with msTALI, Paul Shealy, Homayoun Valafar
Faculty Publications

Structure and Dynamics of Proteins from Nuclear Magnetic Resonance Spectroscopy, Homayoun Valafar, Stephanie J. Irausquin
Faculty Publications

2011

Backbone Resonance Assignment and Order Tensor Estimation Using Residual Dipolar Couplings, Paul Shealy, Yizhou Liu, Mikhail Simin, Homayoun Valafar
Faculty Publications

2010

Simultaneous Structure and Dynamics of a Membrane Protein Using Redcraft: Membrane-Bound Form of pf1 Coat Protein, Paul Shealy, Mikhail Simin, Sang Ho Park, Stanley J. Opella, Homayoun Valafar
Faculty Publications

2009

Phage-Induced Alignment of Membrane Proteins Enables the Measurement and Structural Analysis of Residual Dipolar Couplings with Dipolar Waves and λ-Maps, Sang Ho Park, Woo Sung Son, Rishi Mukhopadhyay, Homayoun Valafar, Stanley J. Opella
Faculty Publications

Phage-Induced Alignment of Membrane Proteins Enables the Measurement and Structural Analysis of Residual Dipolar Couplings with Dipolar Waves and lambda-Maps, Sang Ho Park, Woo Sung Son, Rishi Mukhopadhyay, Homayoun Valafar, Stanley J. Opella
Faculty Publications

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Efficient and Accurate Estimation of Relative Order Tensors from λ-Maps, Rishi Mukhopadhyay, Xijiang Miao, Paul Shealy, Homayoun Valafar
Faculty Publications

REDCAT: A Residual Dipolar Coupling Analysis Tool, Homayoun Valafar, James H. Prestegard
Faculty Publications

2008

Estimation of Relative Order Tensors, and Reconstruction of Vectors in Space Using Unassigned RDC Data and Its Application, Xijiang Miao, Rishi Mukhopadhyay, Homayoun Valafar
Faculty Publications

Rapid Classification of Protein Structure Models Using Unassigned Backbone RDCS and Probability Density Profile Analysis (PDPA), Sonal Bansal, Xijiang Miao, Michael W.W. Adams, James H. Prestegard, Homayoun Valafar
Faculty Publications

Redcraft: A Tool for Simultaneous Characterization of Protein Backbone Structure and Motion from RDC Data, Michael Bryson, Fang Tian, James H. Prestegard, Homayoun Valafar
Faculty Publications

2006

Datamining Protein Structure Databanks for Crystallization Patterns of Proteins, Homayoun Valafar, James H. Prestegard, Faramarz Valafar
Faculty Publications

2005

Assessment of Protein Alignment Using 1h-1h Residual Dipolar Coupling Measurements, Junfeng Wang, Homayoun Valafar, James H. Prestegard
Faculty Publications

Backbone Solution Structures of Proteins Using Residual Dipolar Couplings: Application to a Novel Structural Genomics Target, Homayoun Valafar, K.L. Mayer, C.M. Bougault, P.D. LeBlond, F.E. Jenney Jr., P.S. Brereton, M.W.W. Adams, J.H. Prestegard
Faculty Publications

Determination of Protein Backbone Structures from Residual Dipolar Couplings, James H. Prestegard, K.L. Mayer, Homayoun Valafar, G.C. Benison
Faculty Publications

2004

NMR Structural Studies Reveal a Novel Protein Fold for Merb, the Organomercurial Lyase Involved in the Bacterial Mercury Resistance System, Paola Di Lello, Gregory C. Benison, Homayoun Valafar, Keith E. Pitts, Anne O. Summers, Pascale Legault, James G. Omichinski
Faculty Publications

Assignment of Backbone Resonances from Minimal NMR Data Using Connectivity, Torsion Angle Constraints, and Chemical Shifts, Laura C. Morris, Homayoun Valafar, James H. Prestegard
Faculty Publications

Assignment of Backbone Resonances from Minimal NMR Data Using Connectivity, Laura C. Morris, Homayoun Valafar, James H. Prestegard
Faculty Publications

REDCAT: A Residual Dipolar Coupling Analysis Tool, Homayoun Valafar, James H. Prestegard
Faculty Publications

2003

Rapid Classification of a Protein Fold Family Using a Statistical Analysis of Dipolar Couplings, Homayoun Valafar, James H. Prestegard
Faculty Publications

Conformational Differences in Liganded and Unliganded States of Galectin-3, Kimiko Umemoto, Hakon Leffler, Andre Venot, Homayoun Valafar, James H. Prestegard
Faculty Publications

Utilizing Molecular Symmetry and Dipolar Couplings to Assign the Resonances of a 33kda Protein Complex, M.G. Ford, Homayoun Valafar, James H. Prestegard
Faculty Publications

2002

Data Mining and Knowledge Discovery in Proton Nuclear Magnetic Resonance (1H-NMR) Spectra using Frequency to Information Transformation (FIT), Homayoun Valafar, Frank Valafar
Faculty Publications

2001

A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones, Fang Tian, Homayoun Valafar, James H. Prestegard
Faculty Publications

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A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones, Fang Tian, Homayoun Valafar, James H. Prestegard
Faculty Publications

Nuclear Magnetic Resonance in the Era of Structural Genomics, James H. Prestegard, Homayoun Valafar, J. Glushka, Fang Tian
Faculty Publications

A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones, Fang Tian, Homayoun Valafar, James H. Prestegard
Faculty Publications

2000

Variation of Molecular Alignment as a Means of Resolving Orientational Ambiguities in Protein Structures from Dipolar Couplings, H. M. Al-Hashimi, Homayoun Valafar, M. Terrell, E. R. Zartler, M. K. Eidsness, James H. Prestegard
Faculty Publications

Variation of Molecular Alignment as a Means of Resolving Orientational Ambiguities in Protein Structures from Dipolar Couplings, H.M. Al-Hashimi, Homayoun Valafar, M Terrell, E.R Zartker, M.K. Eidsness, James H. Prestegard
Faculty Publications

Predicting the Effectiveness of Hydroxyurea in Individual Sickle Cell Anemia Patients, Homayoun Valafar, Faramarz Valafar, Alan Darvill, Peter Albersheim, Abdullah Kutlar, Kristy F. Woods, John Hardin
Faculty Publications

Predicting the Effectiveness of Hydroxyurea in Individual Sickle Cell Anemia Patients, Homayoun Valafar, Faramarz Valafar, Alan Darville, Peter Albersheim, Abdullah Kutlar, Kristy F. Woods, John Hardin
Faculty Publications

1999

CCRC-Net: An Internet-Based Spectral Database for Complex Carbohydrates Using Artificial Neural Networks Search Engines, Faramarz Valafar, Homayoun Valafar
Faculty Publications

1998

Cryptococcus Neoformans Chemotyping by Quantitative Analysis of H-1 Nuclear Magnetic Resonance Spectra of Glucuronoxylomannans with a Computer-Simulated Artificial Neural Network, Robert Cherniak, Homayoun Valafar, Laura C. Morris, Faramarz Valafar
Faculty Publications

Cryptococcus Neoformans Chemotyping by Quantitative Analysis of H-1 Nuclear Magnetic Resonance Spectra of Glucuronoxylomannans with a Computer-Simulated Artificial Neural Network, Robert Cherniak, Homayoun Valafar, Laura C. Morris, Faramarz Valafar
Faculty Publications

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