Part of the Biomedical Engineering and Bioengineering Commons

Works in Biomedical Engineering and Bioengineering

2023

EEG Functional Connectivity in Infants at Elevated Familial Likelihood for Autism Spectrum Disorder, Christian O'Reilly, Scott Huberty, Stefon van Noordt, James Desjardins, Nicky Wright, Julie Scorah, Sara Jane Webb, Mayada Elsabbagh, BASIS Team
Publications

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Consolidated Chamber Design and Protocol for Olfactory Conditioning Assay with Drosophila Melanogaster, Sasha Bronovitskiy, Andres Castillo, Michael Yan, Fang Ju Lin
Journal of the South Carolina Academy of Science

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Neurodevelopmental and Transient Impacts of Brain Kynurenic Acid Elevation and Sleep-Wake Behavior, Katherine Rentschler
Theses and Dissertations

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Gluten Free Diet Ameliorates SI Enteropathy in IGA Deficient Mice, Ryan Albert William Ball
Theses and Dissertations

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Detecting Physiological Concentrations of Alzheimer’s Associated Amyloid-β Protein Utilizing a Cell-Based Response, Brittany Elizabeth Watson
Theses and Dissertations

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2022

Histomechanical Compatibility of Coronary Artery Bypass Grafts, Colton J. Kostelnik
Theses and Dissertations

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Investigating the Impact of Endothelial Dysfunction and Aging On Vascular Remodeling Using Mouse Models, Liya Du
Theses and Dissertations

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Role of AhR in the Epigenetic Regulation of Immune Cells in Lungs During Acute Respiratory Distress Syndrome, Bryan Latrell Holloman
Theses and Dissertations

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Role of Epigenome in Regulation of Inflammation By AHR Ligands 2,3,7,8-Tetrachlorodibenzo-P-Dioxin and 6-Formylindolo[3,2-B] Carbazole, Alkeiver Cannon
Theses and Dissertations

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Neurochemical, Molecular, and Behavioral Effects of Intranasal Insulin, Jennifer Marie Erichsen
Theses and Dissertations

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The Effect of Pulsed Field DC Electrophoresis and Field Amplified Sample Stacking on the Microchip Electrophoretic Separation of Organic Dyes, Travis Geoffrey Stewart
Theses and Dissertations

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Long Non-coding RNA PVT1 – An Exploratory Study in Ovarian and Endometrial Cancer, Kevin Tabury
Theses and Dissertations

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Interrogating the Role of ING4 in Hematopoietic Stem Cells and Cancer, Zanshé Thompson
Theses and Dissertations

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Engineering and Optimization of an AAV Based Viral Vector to Limit the In-Vitro Expression of SARS-CoV-2 Spike-Protein, Ronald Anderson Smithwick
Theses and Dissertations

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The Submission of a Section 513(g) Request For Information, Morgan Ashley Lano
Theses and Dissertations

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Antiviral Polymers: A Review, Ali Akbari, Ashkan Bigham, Vahid Rahimkhoei, Sina Sharifi, Esmaiel Jabbari
Faculty Publications

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Editorial for Gels 6th Anniversary Special Issue, Esmaiel Jabbari, Gulden Camci-Unal
Faculty Publications

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Decellularized Articular Cartilage Microgels as Microcarriers for Expansion of Mesenchymal Stem Cells, Esmaiel Jabbari, Azadeh Sepahvandi
Faculty Publications

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Comparing Symbolic and Connectionist Algorithms for Correlating the Age of Healthy Children with Sigma-Lognormal Neuromuscular Parameters, Zigeng Zhang, Christian O'Reilly, Rejean Plamondon
Publications

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The Lognometer: A New Normalized and Computerized Device for Assessing the Neurodevelopment of Fine Motor Control in Children, Christian O'Reilly, Rejean Plamondon, Nadir Faci
Publications

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2021

The Immune Modulatory Role of Endocannabinoid Anandamide to Suppress Inflammation Through Regulation of Microrna and Microbiome, Muthanna Ali Sultan
Theses and Dissertations

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Pseudomyxoma Peritonei Derived Cancers: A Novel Study on Growth and Growth Suppression Utilizing Common Colorectal Cancer Agents, Raymond Kennith Bogdon
Theses and Dissertations

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An in Vitro Approach To Vascular Therapeutic Testing, Shahd Ali Hasanain
Theses and Dissertations

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Anatomical Correlates of Age-Related Basal Forebrain Dysfunction, Brandy Lynn Somera
Theses and Dissertations

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Regulation of Inflammatory Processes by Tryptamine, Cannabidiol and 2,3,7,8-Tetrachlorodibenzo-P-Dioxin, Nicholas Dopkins
Theses and Dissertations

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Nanoparticles for Targeted Drug Delivery to Cancer Stem Cells: A Review of Recent Advances, Yavuz Nuri Ertas, Keyvan Abedi Dorcheh, Ali Akbari, Esmaiel Jabbari
Faculty Publications

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Mechanism of Therapeutic Efficacy of New Drugs in Glioblastoma, Firas Hameed Khathayer
Theses and Dissertations

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Defining the Pathophysiology of Gut Humoral Immunodeficiency, Ahmed Dawood Mohammed
Theses and Dissertations

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Age and Sex Dependency of Thoracic Aortic Aneurysm Progression in a Mouse Model of Marfan Syndrome, Nazli Gharraee
Theses and Dissertations

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Vascular Endothelial Dysfunction and Effects on Arterial Wall Microstructure, Jeffrey Thomas Rodgers
Theses and Dissertations

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2020

A Comparative Study of Cannabinoids & CB1 Receptor GI Signaling, Haley Kristen Andersen
Theses and Dissertations

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cis-Resveratrol Upregulates Tyrosyl-tRNA Synthetase and Inhibits the Proliferation of Select Breast Cancer Cell Lines, Marion Cone Hope III
Theses and Dissertations

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Thermoresponsive Nanogels Based on Different Polymeric Moieties for Biomedical Applications, Sobhan Ghaeini-Hesaroeiye, Hossein Razmi Bagtash, Soheil Boddohi, Ebrahim Vasheghani-Farahani, Esmaiel Jabbari
Faculty Publications

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Thermoresponsive Nanogels Based on Different Polymeric Moieties for Biomedical Applications, Sobhan Ghaeini-Hesaroeiye, Hossein Razmi Bagtash, Soheil Boddohi, Ebrahim Vasheghani-Farahani, Esmaiel Jabbari
Faculty Publications

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The Use of Natural Anthraquinone Emodin as a Primary and Complementary Therapeutic in the Treatment of Colorectal Cancer, Alexander-Jacques Theodore Sougiannis
Theses and Dissertations

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Advanced Geometric Analyses in Vascular Disease and Interventions, Dara Ahmadi Azar
Theses and Dissertations

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Nitric Oxide Expression With Age and Diet in the Arterial Wall of Apoe Knockout Mice, Kara Cooper
Theses and Dissertations

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Effect of Cannabinoid Treatment on Immune Cell Functions During Acute Lung Injury, Amira Kamil Mohammed
Theses and Dissertations

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The Role of Acute and Chronic Neuroinflammation in Depression: Uncovering the Relationship Between Histamine and Serotonin Transmission, Melinda Hersey
Theses and Dissertations

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Using Human Granulosa Cells to Select the Most Competent Embryos for Uterine Transfer in in Vitro Fertilization Cycles, Richard John Kordus
Theses and Dissertations

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2019

Microwave-assisted and One-Step Synthesis of PEG Passivated Fluorescent Carbon Dots from Gelatin as an Efficient Nanocarrier for Methotrexate Delivery, Nasser Arsalani, Parinaz Nezhad-Mokhtari, Esmaiel Jabbari
Faculty Publications

Adipose Tissue Engineering: A Therapeutic Strategy for the Treatment of Obesity and Glucose Intolerance, Michael A. Hendley
Theses and Dissertations

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Experimental Methods and Techniques for Improved Biomechanical Characterization of Diverse Murine Aortopathies, Brooks Alexander Lane
Theses and Dissertations

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Three-Dimensional Collagen Tubes for In Vitro Modeling, Rebecca Jones
Theses and Dissertations

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Experimental Study of Free-Solution Separation Under Pulsed Electrophoresis in Microchip, Xin Liu
Theses and Dissertations

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RAGE Expression and Inflammation in Alzheimer’s Disease: in Vitro Model Development and Investigation of a Potential Peptoid Inhibitor, Lauren Michell Wolf
Theses and Dissertations

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Role of P-Glycoprotein in Alzheimer’s Disease for Enhanced Brain Elimination of Amyloid-β, Hope Holt
Theses and Dissertations

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An Anatomical Basis of the Differential Cholinergic Modulation of Valence-Specific Pyramidal Neurons in the Basolateral Amygdala, Nguyen Vu
Theses and Dissertations

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Analysis of Cellular Interactions Within a Collagen Hydrogel, Austin N. Worden
Theses and Dissertations

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2018

Identification of the Mechanisms Through Which Botanicals Attenuate Pathogenesis of Human Diseases, Esraah Alharris
Theses and Dissertations

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Turning Up Antitumor Immunity Against Breast Cancer, Johnie Hodge
Theses and Dissertations

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Mobile Decision Support Tool for Emergency Departments and Mass Casualty Incidents (EDIT): Initial Study, Nicholas Boltin, Diego Valdes, Joan M. Culley, Homayoun Valafar
Faculty Publications

Increasing Drug Delivery Efficacy of Drug-Coated Balloons, Alexander Galan, Eric Bidinger, Franco Godoy, Shrusti Patel
Senior Theses

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Integration of a Sensory Driven Model for Hand Grasp Function in 3D Printed Prostheses, Austin T. Hetherington
Senior Theses

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Osteon Mimetic Scaffolding, Janay Clytus
Senior Theses

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Optimization of Microfluidic Chip Fabrication via Femtosecond Laser Ablation, Kenneth Aycock
Senior Theses

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Development of Rule-Based Recognition Systems for Continuous Monitorization of Pulse Oximetry, Brian Delehanty
Senior Theses

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Plants as Biofactories to Produce Mammalian Tumor Suppressor Micrornas, John Lachlan MacArthur
Theses and Dissertations

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Matrix Stiffness Modulates Mesenchymal Stem Cell Sensitivity to Geometric Asymmetry Signals, Maria Eugenia Piroli
Theses and Dissertations

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Regulation Of Pituitary Progenitor Differentiation By Β-Catenin, Julie Leann Youngblood
Theses and Dissertations

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Modulation Of Amyloid-β Aggregation Via Small Molecules And Glycine Zipper Alterations, Steven Zebulon Vance
Theses and Dissertations

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Changes Of Dispersal Ability In An Isolated Population, Connor Bacon
Theses and Dissertations

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A Comprehensive Reengineering Of The Hospital Emergency Triage System, Nicholas D. Boltin
Theses and Dissertations

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The Visual Ecology of Speyeria mormonia, Natalie Sanchez Gonzalez
Theses and Dissertations

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Screening of Novel Active Salicylic Acid Analogs and Identification of a Bacterial Effector Targeting Key Proteins Involved in Salicylic Acid-Mediated Defense, Ian Palmer
Theses and Dissertations

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Association Between Mechanics And Biology In Vascular Graft Remodeling, David Andrew Prim
Theses and Dissertations

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A Novel Supercritical CO2-based Decellularization Method for Maintaining Scaffold Hydration and Mechanical Properties, Dominic M. Casali, Rachel M. Handleton, Tarek Shazly, Michael A. Matthews
Faculty Publications

2017

TALI: Local Alignment of Protein Structures Using Backbone Torsion Angles, Xijiang Miao, Peter J. Waddell, Homayoun Valafar
Faculty Publications

Choosing Between Responsive-Design Websites Versus Mobile Apps for Your Mobile Behavioral Intervention: Presenting Four Case Studies, Gabrielle Turner-McGrievy, Sarah B. Hales, Danielle E. Schoffman, Homayoun Valafar, Keith Brazendale, Robert Glenn Weaver, Michael W. Beets, Michael David Wirth, Nitin Shivappa, Trisha Mandes, James R. Hébert, Sara Wilcox, Andrew Hester, Matthew J. McGrievy
Faculty Publications

Evaluation and Modeling of the Different Material Properties of the Captive and Wild Diets of Carnivores, Jill den Outer, Bethany Janos, Elizabeth McCourt, William Molair
Senior Theses

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Trading Pounds for Points: Engagement and Weight Loss in a Mobile Health Intervention, Sarah Hales, Gabrielle M. Turner-McGrievy, Sarah Wilcox, Rachel E. Davis, Arjang Fahim, Michael Huhns, Homayoun Valafar
Faculty Publications

Identification of Novel Cancer Therapeutic Targets Using a Designed and Pooled shrna Library Screen, David Oliver, Hao Ji, Piaomu Liu, Alexander Gasparian, Ellen Gardiner, Samuel Lee, Adrian Zenteno, Lillian O. Perinskaya, Mengqian Chen, Phillip Buckhaults, Eugenia Broude, Michael D. Wyatt, Homayoun Valafar, Edsel A. Pena, Michael Shtutman
Faculty Publications

Atherosclerotic Plaque Adhesion Strength and its role in Plaque Rupture, Bilal Merei
Theses and Dissertations

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Far-Field Optical Microscopy Based on Stimulated Emission Depletion, Yunxia Wang
Theses and Dissertations

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Advancing Automated Methods for Microrna Profiling, Kia N. Zellars
Theses and Dissertations

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2016

A Mixed-Methods Approach to the Development, Refinement, and Pilot Testing of Social Networks for Improving Healthy Behaviors, Sarah Hales, Gabrielle Turner-McGrievy, Arjang Fahim, Andrew Freix, Sara Wilcox, Rachel E. Davis, Michael N. Huhns, Homayoun Valafar
Faculty Publications

Social Networks for Improving Healthy Weight Loss Behaviors for Overweight and Obese Adults: A Randomized Clinical Trial of the Social Pounds off Digitally (Social Pod) Mobile App, Sarah Hales, Gabrielle Turner-McGrievy, Sara Wilcox, Arjang Fahim, Rachel E. Davis, Micheal Huhns, Homayoun Valafar
Faculty Publications

Enabling Studies to Optimize Biomaterials for the Treatment of Myocardial Infarction, Eva Adriana Romito
Theses and Dissertations

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Next Generation Electrode, Joseph Daniel Bivona, Samuel Scott Dacus, Mary Harrell, James Frederick Weber Pike
Senior Theses

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Orthopedic Drill System with Screw Length Measurement and Heat Sink System, Hunter Wilcox Rafoth, John Patrick Metz
Senior Theses

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Structure Calculation and Reconstruction of Discrete-State Dynamics from Residual Dipolar Couplings., Casey A. Cole, Rishi Mukhopadhyay, Hanin Omar, Mirko Hennig, Homayoun Valafar
Faculty Publications

Transforming Growth Factor-Beta 1 Delivery from Microporous Scaffolds Decreases Inflammation Post-Implant and Enhances Function of Transplanted Islets, Jeffrey M.H. Liu, Jesse Zhang, Xiaomin Zhang, Kelan A. Hlavaty, Christine F. Ricci, Joshua N. Leonard, Lonnie D. Shea, R. Michael Gower
Faculty Publications

A Mechanical Approach to the Characterization of Material Failure of Atherosclerotic Lesions, Lindsey A. Davis
Theses and Dissertations

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Therapeutic Potential Of Catechins And Derivatives For The Prevention Of Alzheimer’s Disease, Shelby Elaine Chastain
Theses and Dissertations

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A Theoretical Study of Polymer based Drug Delivery Systems, Ebtisam Abdullatif Aldaais
Theses and Dissertations

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Automated Image Analysis And Spatial Computational Modeling Of NF-kB In Cerebrovascular Endothelial Cells, Kasey Catalfomo
Theses and Dissertations

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2015

Effects of Cell Adhesion Peptides, pH, and Matrix Shape on Maintenance of Breast Cancer Stem Cells in an Engineered Hydrogel Matrix, Leily Daneshian
Theses and Dissertations

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Modeling of Experimental Atherosclerotic Plaque Delamination, X. Leng, X. Chen, X. Deng, M. A. Sutton, Susan M. Lessner
Faculty Publications

New Design of Nasogastric Decompression Tube That Incorporates a Self-Cleaning Brushing Mechanism, Nichole Abla, Lindsay Rucker, Paige Schroder
Senior Theses

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Nanoparticles for Stem-Cell Engineering, Esmaiel Jabbari
Faculty Publications

Design and Development of a Ventilation Chamber for Testing Efficacy of Tracheal Stents, Caroline N. Horton
Theses and Dissertations

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Material Considerations for Development of 3D Printed Bronchial and Tracheal Stents, Nidah M. Hussain
Theses and Dissertations

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2014

Improvements to Redcraft: A Software Tool for Simultaneous Characterization of Protein Backbone Structure and Dynamics from Residual Dipolar Couplings, Mikhail Simin, Stephanie Irausquin, Casey A. Cole, Homayoun Valafar
Faculty Publications

Experimental and Theoretical Studies of Native and Engineered Vascular Tissue Mechanics, Boran Zhou
Theses and Dissertations

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Berberine-Induced Apoptosis in Human Breast Cancer Cells is Mediated by Reactive Oxygen Species Generation and Mitochondrial-Related Apoptotic Pathway, Juan Xie, Yinyan Xu, Xinyan Huang, Yanni Chen, Jing Fu, Mingming Xi, Li Wang
Faculty Publications

A Three-Dimensional in Vitromodel of Atherogenesis, Pin Hsuan Chang
Theses and Dissertations

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Developing a Bioreactor for Biaxial Mechanical Testing and Conditioning of Vascular Tissue, Steve Marcous
Theses and Dissertations

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Cellularized Microcarriers As Adhesive Building Blocks For Fabrication Of Tubular Tissue Constructs, W. O. Twal, S. C. Klatt, K. Harikrishnan, E. Gerges, M. A. Cooley, T. C. Trusk, B. Zhou, M. G. Gabr, T. Shazly, Susan M. Lessner, R. Markwald, W. S. Argraves
Faculty Publications

Uncertainty Quantification Driven Predictive Multi-Scale Model for Synthesis of Mycotoxins, Sourav Banerjee, Gabriel A. Terejanu, Anindya Chanda
Faculty Publications

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Plant Virus Incorporated Hydrogels as Scaffolds for Tissue Engineering Possess Low Immunogenicity in Vivo, Jittima Amie Luckanagul, L. Andrew Lee, Shaojin You, Xioming Yang, Qian Wang
Faculty Publications

Modulation of Leukocyte Infiltration and Phenotype in Microporous Tissue Engineering Scaffolds via Vector Induced Il-10 Expression, R. Michael Gower, Ryan M. Boehler, Samira M. Azarin, Christine F. Ricci, Joshua N. Leonard, Lonnie D. Shea
Faculty Publications

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Dynafold: A Dynamic Programming Approach to Protein Backbone Structure Determination from Minimal Sets of Residual Dipolar Couplings, Rishi Mukhopadhyay, Stephanie Irausquin, Christopher Schmidt, Homayoun Valafar
Faculty Publications

Discovery and Characterization of Multi-Target Directed Ligands as Inhibitors of Amyloid-β Aggregation and Regulators of Alzheimer's Disease, Jui-Heng Tseng
Theses and Dissertations

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Isolation of Natural Nrf2 Activators from American Ginseng, Akrm Abdalrahman
Theses and Dissertations

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Identifying Performance Criteria of Fully Bioresorbable Scaffolds for Endovascular Applications, Jahid Ferdous
Theses and Dissertations

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Novel Conditioning Protocols Focusing on Oxygen Manipulation to Enhance Stem Cell Transplantation, Brandon William Hanna
Theses and Dissertations

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Bioinspired Nanomaterials for Bone Regeneration, Esmaiel Jabbari
Faculty Publications

2013

Detecting Smoking Events Using Accelerometer Data Collected via Smartwatch Technology: A Feasibility Study, Casey A Cole, Dien Anshari, Victoria Lambert, Jim Thrasher, Homayoun Valafar
Faculty Publications

Advances in the REDCAT Software Package, Christopher Schmidt, Stephanie J. Irausquin, Homayoun Valafar
Faculty Publications

On-Chip Phenotypic Analysis of Inflammatory Monocytes in Atherogenesis and Myocardial Infarction, Greg A. Foster, R. Michael Gower, Kimber L. Stanhope, Peter J. Havel, Scott I. Simon, Ehrin J. Armstrong
Faculty Publications

Protein Structure Validation and Identification from Unassigned Residual Dipolar Coupling Data Using 2D-PDPA, Arjang Fahim, Rishi Mukhopadhyay, Ryan Yandle, James H. Prestegard, Homayoun Valafar
Faculty Publications

A Plg/Hap Composite Scaffold for Lentivirus Delivery, R.M. Boehler, S. Shin, A.G. Fast, R. Michael Gower, L.D. Shea
Faculty Publications

PLG Scaffold Delivered Antigen-Specific Regulatory T Cells Induce Systemic Tolerance in Autoimmune Diabetes, John G. Graham, Xiaomin Zhang, Ashley Goodman, Kathryn Pothoven, Josetta Houlihan, Shusen Wang, R. Michael Gower, Xunrong Luo, Lonnie D. Shea
Faculty Publications

Adhesive Strength Of Atherosclerotic Plaque In A Mouse Model Depends On Local Collagen Content And Elastin Fragmentation, Y. Wang, J. A. Johnson, A. Fulp, M. A. Sutton, Susan M. Lessner
Faculty Publications

Toward Directing Cell Fate: Carbon Nanotubes As Modulators of Extracellular and Transporters of Intracellular Cues, Qingsu Cheng
Theses and Dissertations

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An Artificial Neural Network Approach to Improving the Correlation Between Protein Energetics and the Backbone Structure, Timothy M. Fawcett, Stephanie J. Irausquin, Mikhail Simin, Homayoun Valafar
Faculty Publications

Biomechanics of Porcine Renal Artery and the Development of A Replacment Vessel, Mohamed Gabr
Theses and Dissertations

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Integrating Top-Down and Bottom-Up Scaffolding Tissue Engineering Approach for Bone Regeneration, M. Ramalingam, Esmaiel Jabbari, S. Ramakrishna, A. Khademhosseini
Faculty Publications

Hydrogels for lentiviral Gene Delivery, Stephanie K Seidlits, Robert Michael Gower, Jaclyn A Shepard, Lonnie D Shea
Faculty Publications

2012

A Review of REDCRAFT: Simultaneous Investigation of Structure and Dynamics of Proteins from RDC Restraints, Homayoun Valafar, Mikhail Simin, Stephanie Irausquin
Faculty Publications

Multiple Structure Alignment with msTALI, Paul Shealy, Homayoun Valafar
Faculty Publications

Polyvalent Display of RGD Motifs on Turnip Yellow Mosaic Virus for Enhanced Stem Cell Adhesion and Spreading, Xingjie Zan, Pongkwan Sitasuwan, Joshua Powell, Theo W. Dreher, Qian Wang
Faculty Publications

Structure and Dynamics of Proteins from Nuclear Magnetic Resonance Spectroscopy, Homayoun Valafar, Stephanie J. Irausquin
Faculty Publications

A Novel Quantitative Mechanical Test of Atherosclerotic Plaque Stability, Ying Wang
Theses and Dissertations

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Mutation Analysis of Disease Causing Proteins, A. M. Mondai, Jianjun Hu
Faculty Publications

2011

Engineering a 3D, biological construct: Representative research in the South Carolina Project for Organ Biofabrication, T. S. Little, V. Mironov, A. Nagy-Mehesz, R. Markwald, Y. Sugi, Susan M. Lessner, M. A. Sutton, X. Liu, Q. Wang, X. Wang, J. O. Blanchette, M. Skiles
Faculty Publications

Development of a Quantitative Mechanical Test of Atherosclerotic Plaque Stability, Y. Wang, J. Ning, J. A. Johnson, M. A. Sutton, Susan M. Lessner
Faculty Publications

Backbone Resonance Assignment and Order Tensor Estimation Using Residual Dipolar Couplings, Paul Shealy, Yizhou Liu, Mikhail Simin, Homayoun Valafar
Faculty Publications

Functional Characterization of Embryonic Stem Cell-Derived Endothelial Cells, Drew E. Glaser, Robert M. Gower, Nicholas E. Lauer, Kayan Tam, Alicia A. Blancas, Albert J. Shih, Scott I. Simon, Kara E. McCloskey
Faculty Publications

Mechanical Identification of Layer-Specific Properties of Mouse Carotid Arteries Using 3D-DIC and a Hyperelastic Anisotropic Constitutive Model, P. Badel, S. Avril, Susan M. Lessner, M. A. Sutton
Faculty Publications

Speckle Patterning of Soft Tissues For Strain Field Measurement Using Digital Image Correlation: Preliminary Quality Assessment of Patterns, J. Ning, V. G. Braxton, Y. Wang, M. A. Sutton, Y. Wang, Susan M. Lessner
Faculty Publications

CD11c/CD18 Expression Is Upregulated on Blood Monocytes During Hypertriglyceridemia and Enhances Adhesion to Vascular Cell Adhesion Molecule-1, R. Michael Gower, Huaizhu Wu, Greg A. Foster, Sridevi Devaraj, Ishwarlal Jialal, Christie M. Ballantyne, Anne A. Knowlton, Scott I. Simon
Faculty Publications

2010

Simultaneous Structure and Dynamics of a Membrane Protein Using Redcraft: Membrane-Bound Form of pf1 Coat Protein, Paul Shealy, Mikhail Simin, Sang Ho Park, Stanley J. Opella, Homayoun Valafar
Faculty Publications

The Synergistic Effects of Multivalent Ligand Display and Nanotopography on Osteogenic Differentiation of Rat Bone Marrow Stem Cells, Gagandeep Kaur, Chao Wang, Jian Sun, Qian Wang
Faculty Publications

NetLoc: Network Based Protein Localization Prediction Using Protein-Protein Interaction and Co-Expression Networks, A. M. Mondal, Jianjun Hu
Faculty Publications

Efficient Protein-Ligand Docking Using Sustainable Evolutionary Algorithms, E. Atilgan, Jianjun Hu
Faculty Publications

Dose-Responsive Gene Expression Changes in Juvenile and Adult Mummichogs (Fundulus heteroclitus) after Arsenic Exposure, H. O. Gonzalez, Jianjun Hu, K. M. Gaworecki, J. A. Roling, W. S. Baldwin, J. L. Gardea-Torresdey, L. J. Bain
Faculty Publications

NetLoc: Network Based Protein Localization Prediction Using Protein-Protein Interaction and Co-Expression Networks, A. M. Mondal, Jianjun Hu
Faculty Publications

2009

Regulation of Osteogenic Differentiation of Rat Bone Marrow Stromal Cells on 2D Nanorod Substrates, Gagandeep Kaur, Mani T. Valarmathi, Jay D. Potts, Esmaiel Jabbari, Tara Sabo-Attwood, Qian Wang
Faculty Publications

Phage-Induced Alignment of Membrane Proteins Enables the Measurement and Structural Analysis of Residual Dipolar Couplings with Dipolar Waves and λ-Maps, Sang Ho Park, Woo Sung Son, Rishi Mukhopadhyay, Homayoun Valafar, Stanley J. Opella
Faculty Publications

Focused in vivo Genetic Analysis of Implanted Engineered Myofascial Constructs, J. T. Propst, S. A. Fann, J. L. Franchini, Susan M. Lessner, J. R. Rose, K. J. Hansen, L. Terracio, M. J. Yost
Faculty Publications

Efficient and Accurate Estimation of Relative Order Tensors from λ-Maps, Rishi Mukhopadhyay, Xijiang Miao, Paul Shealy, Homayoun Valafar
Faculty Publications

Vav1 Is Essential for Mechanotactic Crawling and Migration of Neutrophils out of the Inflamed Microvasculature, M. Phillipson, B. Heit, S. A. Parsons, B. Petri, S. C. Mullaly, P. Colarusso, R. Michael Gower, G. Neely, S. I. Simon, P. Kubes
Faculty Publications

Functional Role of CD11c+ Monocytes in Atherogenesis Associated With Hypercholesterolemia, Huaizhu Wu, R. Michael Gower, Hong Wang, Xiao-Yuan Dai Perrard, Ruidong Ma, Daniel C. Bullard, Alan R. Burns, Antoni Paul, C. Wayne Smith, Scott I. Simon, Christie M. Ballantyne
Faculty Publications

REDCAT: A Residual Dipolar Coupling Analysis Tool, Homayoun Valafar, James H. Prestegard
Faculty Publications

Bayesian Classifier for Anchored Protein Sorting Discovery, F. Zhang, Jianjun Hu
Faculty Publications

2008

Estimation of Relative Order Tensors, and Reconstruction of Vectors in Space Using Unassigned RDC Data and Its Application, Xijiang Miao, Rishi Mukhopadhyay, Homayoun Valafar
Faculty Publications

The Promotion of Osteoblastic Differentiation of Rat Bone Marrow Stromal Cells by a Polyvalent Plant Mosaic Virus, Gagandeep Kaur, Mani T. Valarmathi, Jay D. Potts, Qian Wang
Faculty Publications

Rapid Classification of Protein Structure Models Using Unassigned Backbone RDCS and Probability Density Profile Analysis (PDPA), Sonal Bansal, Xijiang Miao, Michael W.W. Adams, James H. Prestegard, Homayoun Valafar
Faculty Publications

Spatial Regulation of Inflammation by Human Aortic Endothelial Cells in a Linear Gradient of Shear Stress, Jean K. Tsou, R. Michael Gower, Harold J. Ting, Ulrich Y. Schaff, Michael F. Insana, Anthony G. Passerini, Scott I. Simon
Faculty Publications

Redcraft: A Tool for Simultaneous Characterization of Protein Backbone Structure and Motion from RDC Data, Michael Bryson, Fang Tian, James H. Prestegard, Homayoun Valafar
Faculty Publications

2006

CdTe and Cd0.9Zn0.1Te Crystal Growth and Characterization for Nuclear Spectrometers, K. C. Mandal, S. H. Kang, M. Choi, G. Wright, G. E. Jellison
Faculty Publications

Amorphous Selenium Based Detectors for Medical Imaging Applications, K. C. Mandal, S. H. Kang, M. Choi, G. E. Jellison
Faculty Publications

Detection, Stimulation, and Inhibition of Neuronal Signals with High-Density Nanowire Transistor Arrays, Fernando Patolsky, Brian P. Timko, Guihua Yu, Ying Fang, Andrew B. Greytak, Gengfeng Zheng, Charles M. Lieber
Faculty Publications

Datamining Protein Structure Databanks for Crystallization Patterns of Proteins, Homayoun Valafar, James H. Prestegard, Faramarz Valafar
Faculty Publications

2005

Matrix Metalloproteinase (MMP)-9 Facilitates Collagen Remodeling and Angiogenesis for Vascular Constructs, H. J. Sung, C. E. Johnson, Susan M. Lessner, R. Magid, D. N. Drury, Z. S. Galis
Faculty Publications

Assessment of Protein Alignment Using 1h-1h Residual Dipolar Coupling Measurements, Junfeng Wang, Homayoun Valafar, James H. Prestegard
Faculty Publications

Backbone Solution Structures of Proteins Using Residual Dipolar Couplings: Application to a Novel Structural Genomics Target, Homayoun Valafar, K.L. Mayer, C.M. Bougault, P.D. LeBlond, F.E. Jenney Jr., P.S. Brereton, M.W.W. Adams, J.H. Prestegard
Faculty Publications

Determination of Protein Backbone Structures from Residual Dipolar Couplings, James H. Prestegard, K.L. Mayer, Homayoun Valafar, G.C. Benison
Faculty Publications

2004

Compensatory Vascular Remodeling during Atherosclerotic Lesion Growth Depends on Matrix Metalloproteinase-9 Activity, Susan M. Lessner, D. E. Martinson, Z. S. Galis
Faculty Publications

Cumulative Contents for 2004, Xinyu Huang
Faculty Publications

Nanowire Photonic Circuit Elements, Carl J. Barrelet, Andrew B. Greytak, Charles M. Lieber
Faculty Publications

NMR Structural Studies Reveal a Novel Protein Fold for Merb, the Organomercurial Lyase Involved in the Bacterial Mercury Resistance System, Paola Di Lello, Gregory C. Benison, Homayoun Valafar, Keith E. Pitts, Anne O. Summers, Pascale Legault, James G. Omichinski
Faculty Publications

Assignment of Backbone Resonances from Minimal NMR Data Using Connectivity, Torsion Angle Constraints, and Chemical Shifts, Laura C. Morris, Homayoun Valafar, James H. Prestegard
Faculty Publications

Assignment of Backbone Resonances from Minimal NMR Data Using Connectivity, Laura C. Morris, Homayoun Valafar, James H. Prestegard
Faculty Publications

Matrix Metalloproteinases and Vascular Endothelium-Mononuclear Cell Close Encounters, Susan M. Lessner, Z. S. Galis
Faculty Publications

Wireless Access Point Configuration by Genetic Programming, Jianjun Hu, E. Goodman
Faculty Publications

2003

Rapid Classification of a Protein Fold Family Using a Statistical Analysis of Dipolar Couplings, Homayoun Valafar, James H. Prestegard
Faculty Publications

Acoustic Transmission in Normal Human Hips: Structural Testing of Joint Symmetry, Kevin S.C. Kwong, Xiaolin Huang, Jack Chun Yiu Cheng, John H. Evans
Faculty Publications

New Technique for Early Screening of Developmental Dysplasia of the Hip: Pilot Study, Kevin S. Kwong, Xiaolin Huang, Jack Chun Yiu Cheng, John Evans
Faculty Publications

Conformational Differences in Liganded and Unliganded States of Galectin-3, Kimiko Umemoto, Hakon Leffler, Andre Venot, Homayoun Valafar, James H. Prestegard
Faculty Publications

2002

Data Mining and Knowledge Discovery in Proton Nuclear Magnetic Resonance (1H-NMR) Spectra using Frequency to Information Transformation (FIT), Homayoun Valafar, Frank Valafar
Faculty Publications

2001

A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones, Fang Tian, Homayoun Valafar, James H. Prestegard
Faculty Publications

Nuclear Magnetic Resonance in the Era of Structural Genomics, James H. Prestegard, Homayoun Valafar, J. Glushka, Fang Tian
Faculty Publications

A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones, Fang Tian, Homayoun Valafar, James H. Prestegard
Faculty Publications

2000

Variation of Molecular Alignment as a Means of Resolving Orientational Ambiguities in Protein Structures from Dipolar Couplings, H.M. Al-Hashimi, Homayoun Valafar, M Terrell, E.R Zartker, M.K. Eidsness, James H. Prestegard
Faculty Publications

Predicting the Effectiveness of Hydroxyurea in Individual Sickle Cell Anemia Patients, Homayoun Valafar, Faramarz Valafar, Alan Darvill, Peter Albersheim, Abdullah Kutlar, Kristy F. Woods, John Hardin
Faculty Publications

Predicting the Effectiveness of Hydroxyurea in Individual Sickle Cell Anemia Patients, Homayoun Valafar, Faramarz Valafar, Alan Darville, Peter Albersheim, Abdullah Kutlar, Kristy F. Woods, John Hardin
Faculty Publications

1999

CCRC-Net: An Internet-Based Spectral Database for Complex Carbohydrates Using Artificial Neural Networks Search Engines, Faramarz Valafar, Homayoun Valafar
Faculty Publications

1998

Cryptococcus Neoformans Chemotyping by Quantitative Analysis of H-1 Nuclear Magnetic Resonance Spectra of Glucuronoxylomannans with a Computer-Simulated Artificial Neural Network, Robert Cherniak, Homayoun Valafar, Laura C. Morris, Faramarz Valafar
Faculty Publications

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