Part of the Bioinformatics Commons

Works in Bioinformatics

2023

BE-03 Effects of Dietary Iron on Taxonomic Composition and Function of the Zebrafish Gut Microbiome, Megan D. Whisonant, Jeremiah L. Jackson, Sam L. Evans, Stuart Gordon Ph.D.
SC Upstate Research Symposium

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DNA Methylation of Genes Enriched in Cell Adhesion and Synaptic Plasticity is Correlated with the Habituation of Song Response in Zebra Finches, Prakrit Subba, Julia George
SC Upstate Research Symposium

2014

Imaging the Invisible Instillation View 1, Allison Marsh
Installation

Art or Science?, Allison Marsh
Section 3: Imaging the Fast Moving

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Computational Identification of Post-Translational Modification-Based Nuclear Import Regulations by Characterizing Nuclear Localization Signal-Import Receptor Interaction, J.-R. Lin, Z. Liu, Jianjun Hu
Faculty Publications

2013

Scored Protein-Protein Interaction to Predict Subcellular Localizations for Yeast Using Diffusion Kernel, A. M. Mondal, Jianjun Hu
Faculty Publications

SeqNLS: Nuclear Localization Signal Prediction Based on Frequent Pattern Mining and Linear Motif Scoring, J.-R. Lin, Jianjun Hu
Faculty Publications

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DNABind: A Hybrid Algorithm for Structure-Based Prediction of DNA-Binding Residues by Combining Machine Learning- and Template-Based Approaches, R. Liu, Jianjun Hu
Faculty Publications

2012

Observing the Minuscule, Allison Marsh
Section 2: Imaging the Microscopic

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Spotlight on USC: A.C. Moore Herbarium, Allison Marsh
Section 2: Imaging the Microscopic

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Exhibit as Installed View 5, Allison Marsh
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Minimalist Ensemble Algorithms for Genome-Wide Protein Localization Prediction, J.-R. Lin, A. M. Mondal, R. Liu, Jianjun Hu
Faculty Publications

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Influencing Art, Allison Marsh
Section 3: Imaging the Fast Moving

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Imaging in 3-D, Allison Marsh
Section 1: Introduction

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How Small is Small?, Allison Marsh
Section 1: Introduction

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Questioning Images, Allison Marsh
Section 1: Introduction

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wall_1.6 — Acknowledgements, Allison Marsh
Section 1: Introduction

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Powers of Ten, Allison Marsh
Section 1: Introduction

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USC Image Center, Allison Marsh
Section 1: Introduction

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Spotlight on USC: Mechanical Engineering, Allison Marsh
Section 3: Imaging the Fast Moving

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Photographic Evidence, Allison Marsh
Section 3: Imaging the Fast Moving

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Listen, Allison Marsh
Section 3: Imaging the Fast Moving

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Understanding Fracture, Allison Marsh
Section 3: Imaging the Fast Moving

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Capturing Motion, Allison Marsh
Section 3: Imaging the Fast Moving

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Imaging the Invisible Instillation View 5, Allison Marsh
Installation

Imaging the Invisible Instillation View 6, Allison Marsh
Installation

Imaging the Invisible Instillation View 7, Allison Marsh
Installation

Imaging the Invisible Instillation View 8, Allison Marsh
Installation

Imaging the Invisible Instillation View 4, Allison Marsh
Installation

Imaging the Invisible Instillation View 3, Allison Marsh
Installation

Imaging the Invisible Instillation View 2, Allison Marsh
Installation

Exhibit as Installed View 36, Allison Marsh
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Exhibit as Installed View 1, Allison Marsh
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Imaging and Aesthetics, Allison Marsh
Section 2: Imaging the Microscopic

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Why do We Collect?, Allison Marsh
Section 2: Imaging the Microscopic

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Marie Tharp at her Drafting Table, Courtesy of the Lamont-Doherty Earth Observatory, Earth Institute, Columbia University, Allison Marsh
Section 4: Imaging the Concealed

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World Ocean Floor, Courtesy of the Library of Congress, Allison Marsh
Section 4: Imaging the Concealed

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Seeing with Sound, Allison Marsh
Section 4: Imaging the Concealed

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Spotlight on USC: South Carolina Institute for Anthropology and Archaeology, Allison Marsh
Section 4: Imaging the Concealed

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Mapping the Ocean Frontier, Allison Marsh
Section 4: Imaging the Concealed

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Conclusion Panel, Allison Marsh
Section 6: Conclusion

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2011

Computational Prediction of Heme-Binding Residues by Exploiting Residue Interaction Network, R. Liu, Jianjun Hu
Faculty Publications

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Prediction of Discontinuous B-Cell Epitopes Using Logistic Regression and Structural Information, R. Liu, Jianjun Hu
Faculty Publications

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HemeBIND: A Novel Method for Heme Binding Residue Prediction by Combining Structural and Sequence Information, R. Liu, Jianjun Hu
Faculty Publications

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2010

Proteomic Characterization of HER-2/Neu-Overexpressing Breast Cancer Cells, Hexin Chen, G. Pimienta, Y. Gu, X. Sun, Jianjun Hu, M.-S. Kim, R. Chaerkady, M. Gucek, R. N. Cole, S. Sukumar, A. Pandey
Faculty Publications

BayesMotif: De Novo Protein Sorting Motif Discovery from Impure Datasets, Jianjun Hu, F. Zhang
Faculty Publications

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2009

Improving Protein Localization Prediction Using Amino Acid Group Based Physichemical Encoding, Jianjun Hu, F. Zhang
Faculty Publications

Subcellular Localization of Marine Bacterial Alkaline Phosphatases, H. Luo, Ronald Benner, R. A. Long, Jianjun Hu
Faculty Publications

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Integrative Disease Classification Based on Cross-Platform Microarray Data, C.-C. Liu, Jianjun Hu, M. Kalakrishnan, H. Huang, X. J. Zhou
Faculty Publications

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2006

EMD: An Ensemble Algorithm for Discovering Regulatory Motifs in DNA Sequences, Jianjun Hu, Y. D. Yang, D. Kihara
Faculty Publications

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Integrative Missing Value Estimation for Microarray Data, Jianjun Hu, H. Li, M. S. Waterman, X. J. Zhou
Faculty Publications

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2005

Limitations and Potentials of Current Motif Discovery Algorithms, Jianjun Hu, Bin Li, D. Kihara
Faculty Publications

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2004

Robust and Efficient Genetic Algorithms with Hierarchical Niching and a Sustainable Evolutionary Computation Model, Jianjun Hu, E. Goodman
Faculty Publications

2003

HEMO: A Sustainable Multi-objective Evolutionary Optimization Framework, Jianjun Hu, K. Seo, Z. Fan, R. C. Rosenberg, E. D. Goodman
Faculty Publications